IL_6OLZ_243
3D structure
- PDB id
- 6OLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GUGCCUACC*GUAACC
- Length
- 15 nucleotides
- Bulged bases
- 6OLZ|1|B1|C|1553, 6OLZ|1|B1|C|1554, 6OLZ|1|B1|A|1580
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLZ_243 not in the Motif Atlas
- Geometric match to IL_4LFB_052
- Geometric discrepancy: 0.3959
- The information below is about IL_4LFB_052
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_08849.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
6OLZ|1|B1|G|1550
6OLZ|1|B1|U|1551
6OLZ|1|B1|G|1552
6OLZ|1|B1|C|1553
6OLZ|1|B1|C|1554
6OLZ|1|B1|U|1555
6OLZ|1|B1|A|1556
6OLZ|1|B1|C|1557
6OLZ|1|B1|C|1558
*
6OLZ|1|B1|G|1577
6OLZ|1|B1|U|1578
6OLZ|1|B1|A|1579
6OLZ|1|B1|A|1580
6OLZ|1|B1|C|1581
6OLZ|1|B1|C|1582
Current chains
- Chain B1
- 18S ribosomal RNA
Nearby chains
- Chain BD
- 40S ribosomal protein S3
- Chain BK
- 40S ribosomal protein S10
- Chain BQ
- 40S ribosomal protein S16
- Chain BT
- 40S ribosomal protein S19
- Chain BU
- 40S ribosomal protein S20
- Chain Bd
- 40S ribosomal protein S29
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