IL_6OLZ_306
3D structure
- PDB id
- 6OLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CCUGCG*CGCGCG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLZ_306 not in the Motif Atlas
- Geometric match to IL_5TBW_476
- Geometric discrepancy: 0.271
- The information below is about IL_5TBW_476
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31007.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 5
Unit IDs
6OLZ|1|B1|C|1230
6OLZ|1|B1|C|1231
6OLZ|1|B1|U|1232
6OLZ|1|B1|G|1233
6OLZ|1|B1|C|1234
6OLZ|1|B1|G|1235
*
6OLZ|1|B1|C|1523
6OLZ|1|B1|G|1524
6OLZ|1|B1|C|1525
6OLZ|1|B1|G|1526
6OLZ|1|B1|C|1527
6OLZ|1|B1|G|1528
Current chains
- Chain B1
- 18S ribosomal RNA
Nearby chains
- Chain BP
- 40S ribosomal protein S15
- Chain BQ
- 40S ribosomal protein S16
- Chain BS
- 40S ribosomal protein S18
- Chain BT
- 40S ribosomal protein S19
- Chain BU
- 40S ribosomal protein S20
- Chain BZ
- 40S ribosomal protein S25
- Chain Bv
- Transfer RNA; tRNA
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