IL_6OLZ_309
3D structure
- PDB id
- 6OLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CGU*ACAG
- Length
- 7 nucleotides
- Bulged bases
- 6OLZ|1|B1|A|1489
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLZ_309 not in the Motif Atlas
- Geometric match to IL_5UNE_009
- Geometric discrepancy: 0.2358
- The information below is about IL_5UNE_009
- Detailed Annotation
- Isolated non-canonical cWW contact
- Broad Annotation
- No text annotation
- Motif group
- IL_87720.1
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 8
Unit IDs
6OLZ|1|B1|C|1337
6OLZ|1|B1|G|1338
6OLZ|1|B1|U|1339
*
6OLZ|1|B1|A|1487
6OLZ|1|B1|C|1488
6OLZ|1|B1|A|1489
6OLZ|1|B1|G|1490
Current chains
- Chain B1
- 18S ribosomal RNA
Nearby chains
- Chain BC
- 40S ribosomal protein S2
- Chain BD
- 40S ribosomal protein S3
- Chain BQ
- 40S ribosomal protein S16
- Chain BU
- 40S ribosomal protein S20
- Chain Bd
- 40S ribosomal protein S29
- Chain Bx
- mRNA
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