IL_6OLZ_328
3D structure
- PDB id
- 6OLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CGCU*AAAAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLZ_328 not in the Motif Atlas
- Homologous match to IL_8P9A_455
- Geometric discrepancy: 0.4545
- The information below is about IL_8P9A_455
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05553.1
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
6OLZ|1|B1|C|1708
6OLZ|1|B1|G|1709
6OLZ|1|B1|C|1710
6OLZ|1|B1|U|1711
*
6OLZ|1|B1|A|1822
6OLZ|1|B1|A|1823
6OLZ|1|B1|A|1824
6OLZ|1|B1|A|1825
6OLZ|1|B1|G|1826
Current chains
- Chain B1
- 18S ribosomal RNA
Nearby chains
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain BX
- 40S ribosomal protein S23
- Chain Be
- 40S ribosomal protein S30
- Chain Bx
- mRNA
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