IL_6OM0_115
3D structure
- PDB id
- 6OM0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAGGA*UUUCC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OM0_115 not in the Motif Atlas
- Geometric match to IL_5TBW_121
- Geometric discrepancy: 0.2181
- The information below is about IL_5TBW_121
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05145.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 13
Unit IDs
6OM0|1|t|G|456
6OM0|1|t|A|457
6OM0|1|t|G|458
6OM0|1|t|G|459
6OM0|1|t|A|460
*
6OM0|1|t|U|682
6OM0|1|t|U|683
6OM0|1|t|U|684
6OM0|1|t|C|685
6OM0|1|t|C|686
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain G
- 60S ribosomal protein L6
- Chain r
- 60S ribosomal protein L28
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