IL_6OM0_199
3D structure
- PDB id
- 6OM0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGUAAC*GGAUAAG
- Length
- 13 nucleotides
- Bulged bases
- 6OM0|1|t|U|2859
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OM0_199 not in the Motif Atlas
- Geometric match to IL_4V9F_063
- Geometric discrepancy: 0.1048
- The information below is about IL_4V9F_063
- Detailed Annotation
- tSH-tSH-tHH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_20700.1
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 10
Unit IDs
6OM0|1|t|C|2846
6OM0|1|t|G|2847
6OM0|1|t|U|2848
6OM0|1|t|A|2849
6OM0|1|t|A|2850
6OM0|1|t|C|2851
*
6OM0|1|t|G|2856
6OM0|1|t|G|2857
6OM0|1|t|A|2858
6OM0|1|t|U|2859
6OM0|1|t|A|2860
6OM0|1|t|A|2861
6OM0|1|t|G|2862
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain S2
- Small subunit ribosomal RNA; SSU rRNA
- Chain o
- 60S ribosomal protein L41
- Chain q
- 60S ribosomal protein L37a
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