IL_6OM0_203
3D structure
- PDB id
- 6OM0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAAGG*UGUUGACG
- Length
- 14 nucleotides
- Bulged bases
- 6OM0|1|t|A|3634, 6OM0|1|t|U|3650, 6OM0|1|t|C|3654
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OM0_203 not in the Motif Atlas
- Homologous match to IL_5TBW_083
- Geometric discrepancy: 0.0921
- The information below is about IL_5TBW_083
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_64509.1
- Basepair signature
- cWW-tWW-tWW-tSS-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
6OM0|1|t|C|3631
6OM0|1|t|G|3632
6OM0|1|t|A|3633
6OM0|1|t|A|3634
6OM0|1|t|G|3635
6OM0|1|t|G|3636
*
6OM0|1|t|U|3648
6OM0|1|t|G|3649
6OM0|1|t|U|3650
6OM0|1|t|U|3651
6OM0|1|t|G|3652
6OM0|1|t|A|3653
6OM0|1|t|C|3654
6OM0|1|t|G|3655
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain A
- 60S ribosomal protein L8
- Chain S2
- Small subunit ribosomal RNA; SSU rRNA
- Chain q
- 60S ribosomal protein L37a
Coloring options: