IL_6OM0_220
3D structure
- PDB id
- 6OM0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GACC*GC
- Length
- 6 nucleotides
- Bulged bases
- 6OM0|1|t|C|4311
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OM0_220 not in the Motif Atlas
- Geometric match to IL_5J7L_269
- Geometric discrepancy: 0.2847
- The information below is about IL_5J7L_269
- Detailed Annotation
- Single stack bend
- Broad Annotation
- No text annotation
- Motif group
- IL_26793.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 16
Unit IDs
6OM0|1|t|G|4309
6OM0|1|t|A|4310
6OM0|1|t|C|4311
6OM0|1|t|C|4312
*
6OM0|1|t|G|4326
6OM0|1|t|C|4327
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain M
- 60S ribosomal protein L13
- Chain R
- 60S ribosomal protein L18
- Chain b
- 60S ribosomal protein L27a
- Chain p
- 60S ribosomal protein L36a
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