IL_6OM0_257
3D structure
- PDB id
- 6OM0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGAUAAC*GCUAAUA(OMC)
- Length
- 15 nucleotides
- Bulged bases
- 6OM0|1|S2|U|172
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OM0_257 not in the Motif Atlas
- Homologous match to IL_8C3A_402
- Geometric discrepancy: 0.1164
- The information below is about IL_8C3A_402
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_80604.4
- Basepair signature
- cWW-L-R-tWH-tWH-tHW-L-R-cWW
- Number of instances in this motif group
- 4
Unit IDs
6OM0|1|S2|G|145
6OM0|1|S2|G|146
6OM0|1|S2|A|147
6OM0|1|S2|U|148
6OM0|1|S2|A|149
6OM0|1|S2|A|150
6OM0|1|S2|C|151
*
6OM0|1|S2|G|167
6OM0|1|S2|C|168
6OM0|1|S2|U|169
6OM0|1|S2|A|170
6OM0|1|S2|A|171
6OM0|1|S2|U|172
6OM0|1|S2|A|173
6OM0|1|S2|OMC|174
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SG
- 40S ribosomal protein S6
- Chain SY
- 40S ribosomal protein S24
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