IL_6OM0_273
3D structure
- PDB id
- 6OM0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGAU*GGCAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OM0_273 not in the Motif Atlas
- Homologous match to IL_8C3A_025
- Geometric discrepancy: 0.2234
- The information below is about IL_8C3A_025
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_07235.3
- Basepair signature
- cWW-tSH-L-tHS-cWW
- Number of instances in this motif group
- 8
Unit IDs
6OM0|1|t|G|1408
6OM0|1|t|G|1409
6OM0|1|t|A|1410
6OM0|1|t|U|1411
*
6OM0|1|t|G|1438
6OM0|1|t|G|1439
6OM0|1|t|C|1440
6OM0|1|t|A|1441
6OM0|1|t|C|1442
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain R
- 60S ribosomal protein L18
- Chain c
- 60S ribosomal protein L29
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