IL_6OM0_279
3D structure
- PDB id
- 6OM0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AACAAUG*CUAU
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OM0_279 not in the Motif Atlas
- Homologous match to IL_8P9A_302
- Geometric discrepancy: 0.1097
- The information below is about IL_8P9A_302
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_89862.1
- Basepair signature
- cWW-L-tHS-L-R-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
6OM0|1|t|A|2811
6OM0|1|t|A|2812
6OM0|1|t|C|2813
6OM0|1|t|A|2814
6OM0|1|t|A|2815
6OM0|1|t|U|2816
6OM0|1|t|G|2817
*
6OM0|1|t|C|3821
6OM0|1|t|U|3822
6OM0|1|t|A|3823
6OM0|1|t|U|3824
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain Q
- 60S ribosomal protein L17
- Chain e
- 60S ribosomal protein L31
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