IL_8P9A_302

3D structure

PDB id

8P9A (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S yeast ribosome in complex with Methyllissoclimide

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

AAUAAUG*CUAU

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_89862.1

Basepair signature

cWW-L-tHS-L-R-L-cWW-L

Number of instances in this motif group

5

Unit IDs

8P9A|1|AR|A|1883
8P9A|1|AR|A|1884
8P9A|1|AR|U|1885
8P9A|1|AR|A|1886
8P9A|1|AR|A|1887
8P9A|1|AR|U|1888
8P9A|1|AR|G|1889
*
8P9A|1|AR|C|2346
8P9A|1|AR|U|2347
8P9A|1|AR|A|2348
8P9A|1|AR|U|2349

Current chains

Chain AR

25S ribosomal RNA

Nearby chains

Chain CE

60S ribosomal protein L3

Chain CR

60S ribosomal protein L17-A

Chain DF

60S ribosomal protein L31-A