IL_6OM0_280
3D structure
- PDB id
- 6OM0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AUUAU*AGAAU
- Length
- 10 nucleotides
- Bulged bases
- 6OM0|1|t|A|4670
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OM0_280 not in the Motif Atlas
- Homologous match to IL_8P9A_348
- Geometric discrepancy: 0.2434
- The information below is about IL_8P9A_348
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_08938.1
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 22
Unit IDs
6OM0|1|t|A|4643
6OM0|1|t|U|4644
6OM0|1|t|U|4645
6OM0|1|t|A|4646
6OM0|1|t|U|4647
*
6OM0|1|t|A|4667
6OM0|1|t|G|4668
6OM0|1|t|A|4669
6OM0|1|t|A|4670
6OM0|1|t|U|4671
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain J
- 60S ribosomal protein L9
- Chain P
- 60S ribosomal protein L13a
- Chain n
- 60S ribosomal protein L40
Coloring options: