IL_6OM7_026

3D structure

PDB id

6OM7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GCCACUU*AUGCCGAC*AUGCCGAC

Length

23 nucleotides

Bulged bases

6OM7|1|S2|C|139, 6OM7|1|S2|C|142

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OM7|1|S2|G|130
6OM7|1|S2|C|139
6OM7|1|S2|C|140
6OM7|1|S2|A|141
6OM7|1|S2|C|142
6OM7|1|S2|U|143
6OM7|1|S2|U|144
*
6OM7|1|S2|A|175
6OM7|1|S2|U|176
6OM7|1|S2|G|177
6OM7|1|S2|C|178
6OM7|1|S2|C|179
6OM7|1|S2|G|180
6OM7|1|S2|A|181
6OM7|1|S2|C|182
*
6OM7|1|S2|A|175
6OM7|1|S2|U|176
6OM7|1|S2|G|177
6OM7|1|S2|C|178
6OM7|1|S2|C|179
6OM7|1|S2|G|180
6OM7|1|S2|A|181
6OM7|1|S2|C|182

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SG

40S ribosomal protein S6

Chain SI

40S ribosomal protein S8

Chain X

60S ribosomal protein L24