IL_6OM7_034
3D structure
- PDB id
- 6OM7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UUUCGA*UG
- Length
- 8 nucleotides
- Bulged bases
- 6OM7|1|S2|U|368, 6OM7|1|S2|C|369
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OM7_034 not in the Motif Atlas
- Geometric match to IL_4ERD_001
- Geometric discrepancy: 0.3456
- The information below is about IL_4ERD_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_44609.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 24
Unit IDs
6OM7|1|S2|U|366
6OM7|1|S2|U|367
6OM7|1|S2|U|368
6OM7|1|S2|C|369
6OM7|1|S2|G|370
6OM7|1|S2|A|371
*
6OM7|1|S2|U|393
6OM7|1|S2|G|394
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SI
- 40S ribosomal protein S8
- Chain SL
- 40S ribosomal protein S11
- Chain t
- Large subunit ribosomal RNA; LSU rRNA
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