3D structure

PDB id
6OM7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
CAAUACAG*CCUGUAAUUG
Length
18 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6OM7|1|S2|C|527
6OM7|1|S2|A|528
6OM7|1|S2|A|529
6OM7|1|S2|U|530
6OM7|1|S2|A|531
6OM7|1|S2|C|532
6OM7|1|S2|A|533
6OM7|1|S2|G|534
*
6OM7|1|S2|C|549
6OM7|1|S2|C|550
6OM7|1|S2|U|551
6OM7|1|S2|G|552
6OM7|1|S2|U|553
6OM7|1|S2|A|554
6OM7|1|S2|A|555
6OM7|1|S2|U|556
6OM7|1|S2|U|557
6OM7|1|S2|G|558

Current chains

Chain S2
18S ribosomal RNA

Nearby chains

Chain SJ
40S ribosomal protein S9
Chain Se
40S ribosomal protein S30

Coloring options:

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