IL_6OM7_120

3D structure

PDB id

6OM7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGGUCCGGCCG*CCGGCGACCGGC

Length

23 nucleotides

Bulged bases

6OM7|1|t|C|660

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OM7|1|t|G|475
6OM7|1|t|G|476
6OM7|1|t|G|477
6OM7|1|t|U|478
6OM7|1|t|C|479
6OM7|1|t|C|480
6OM7|1|t|G|481
6OM7|1|t|G|482
6OM7|1|t|C|483
6OM7|1|t|C|484
6OM7|1|t|G|485
*
6OM7|1|t|C|656
6OM7|1|t|C|657
6OM7|1|t|G|658
6OM7|1|t|G|659
6OM7|1|t|C|660
6OM7|1|t|G|661
6OM7|1|t|A|662
6OM7|1|t|C|663
6OM7|1|t|C|664
6OM7|1|t|G|665
6OM7|1|t|G|666
6OM7|1|t|C|667

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain C

60S ribosomal protein L4

Chain R

60S ribosomal protein L18

Chain r

60S ribosomal protein L28