3D structure

PDB id
6OM7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
GCUGGGAAGG*CAGCAGCACUCGC
Length
23 nucleotides
Bulged bases
6OM7|1|t|U|719, 6OM7|1|t|G|720, 6OM7|1|t|A|922, 6OM7|1|t|C|923
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6OM7|1|t|G|717
6OM7|1|t|C|718
6OM7|1|t|U|719
6OM7|1|t|G|720
6OM7|1|t|G|721
6OM7|1|t|G|722
6OM7|1|t|A|723
6OM7|1|t|A|724
6OM7|1|t|G|725
6OM7|1|t|G|726
*
6OM7|1|t|C|915
6OM7|1|t|A|916
6OM7|1|t|G|917
6OM7|1|t|C|918
6OM7|1|t|A|919
6OM7|1|t|G|920
6OM7|1|t|C|921
6OM7|1|t|A|922
6OM7|1|t|C|923
6OM7|1|t|U|924
6OM7|1|t|C|925
6OM7|1|t|G|926
6OM7|1|t|C|927

Current chains

Chain t
28S ribosomal RNA

Nearby chains

Chain C
60S ribosomal protein L4
Chain H
60S ribosomal protein L7
Chain N
60S ribosomal protein L14
Chain T
60S ribosomal protein L18a

Coloring options:

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