IL_6OM7_267
3D structure
- PDB id
- 6OM7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GCGG*CACGC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OM7_267 not in the Motif Atlas
- Geometric match to IL_4WF9_124
- Geometric discrepancy: 0.3204
- The information below is about IL_4WF9_124
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_10994.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
6OM7|1|S2|G|1233
6OM7|1|S2|C|1234
6OM7|1|S2|G|1235
6OM7|1|S2|G|1236
*
6OM7|1|S2|C|1521
6OM7|1|S2|A|1522
6OM7|1|S2|C|1523
6OM7|1|S2|G|1524
6OM7|1|S2|C|1525
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SP
- 40S ribosomal protein S15
- Chain SQ
- 40S ribosomal protein S16
- Chain SS
- 40S ribosomal protein S18
- Chain v
- Transfer RNA; tRNA
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