3D structure

PDB id
6OM7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
CCGGCGCCGCUCGUG*CCGGCGCGCG
Length
25 nucleotides
Bulged bases
6OM7|1|t|U|181, 6OM7|1|t|U|184
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6OM7|1|t|C|171
6OM7|1|t|C|172
6OM7|1|t|G|173
6OM7|1|t|G|174
6OM7|1|t|C|175
6OM7|1|t|G|176
6OM7|1|t|C|177
6OM7|1|t|C|178
6OM7|1|t|G|179
6OM7|1|t|C|180
6OM7|1|t|U|181
6OM7|1|t|C|182
6OM7|1|t|G|183
6OM7|1|t|U|184
6OM7|1|t|G|185
*
6OM7|1|t|C|248
6OM7|1|t|C|249
6OM7|1|t|G|250
6OM7|1|t|G|251
6OM7|1|t|C|252
6OM7|1|t|G|253
6OM7|1|t|C|254
6OM7|1|t|G|255
6OM7|1|t|C|256
6OM7|1|t|G|257

Current chains

Chain t
28S ribosomal RNA

Nearby chains

Chain D
5.8S ribosomal RNA; 5.8S rRNA
Chain M
60S ribosomal protein L13
Chain i
60S ribosomal protein L35
Chain k
60S ribosomal protein L37

Coloring options:

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