IL_6ORD_070

3D structure

PDB id

6ORD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGGACAC*GUG

Length

10 nucleotides

Bulged bases

6ORD|1|RA|C|277

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ORD_070 not in the Motif Atlas

Homologous match to IL_8VTW_009

Geometric discrepancy: 0.3482

The information below is about IL_8VTW_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_45612.4

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

14

Unit IDs

6ORD|1|RA|C|273|||K
6ORD|1|RA|G|274
6ORD|1|RA|G|275
6ORD|1|RA|A|276
6ORD|1|RA|C|277
6ORD|1|RA|A|278
6ORD|1|RA|C|279
*
6ORD|1|RA|G|361
6ORD|1|RA|U|362
6ORD|1|RA|G|363|||A

Current chains

Chain RA

23S rRNA

Nearby chains