IL_6ORD_071

3D structure

PDB id

6ORD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGAAU*AUAG

Length

9 nucleotides

Bulged bases

6ORD|1|RA|A|283

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ORD_071 not in the Motif Atlas

Homologous match to IL_7RQB_011

Geometric discrepancy: 0.1077

The information below is about IL_7RQB_011

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_04059.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

6ORD|1|RA|C|280
6ORD|1|RA|G|281
6ORD|1|RA|A|282
6ORD|1|RA|A|283
6ORD|1|RA|U|284
*
6ORD|1|RA|A|357
6ORD|1|RA|U|358
6ORD|1|RA|A|359
6ORD|1|RA|G|360

Current chains

Chain RA

23S rRNA

Nearby chains