IL_6ORD_078
3D structure
- PDB id
- 6ORD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GAAAC*GAGAUAGC
- Length
- 13 nucleotides
- Bulged bases
- 6ORD|1|RA|G|801, 6ORD|1|RA|G|805
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ORD_078 not in the Motif Atlas
- Geometric match to IL_7RQB_018
- Geometric discrepancy: 0.0645
- The information below is about IL_7RQB_018
- Detailed Annotation
- tHW-tHW cross-strand stack
- Broad Annotation
- No text annotation
- Motif group
- IL_17470.6
- Basepair signature
- cWW-tWW-L-R-tWH-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
6ORD|1|RA|G|674
6ORD|1|RA|A|675
6ORD|1|RA|A|676
6ORD|1|RA|A|677
6ORD|1|RA|C|678
*
6ORD|1|RA|G|799
6ORD|1|RA|A|800
6ORD|1|RA|G|801
6ORD|1|RA|A|802
6ORD|1|RA|U|803
6ORD|1|RA|A|804
6ORD|1|RA|G|805
6ORD|1|RA|C|806
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain RF
- 50S ribosomal protein L4
- Chain RP
- 50S ribosomal protein L15
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