IL_6ORD_145

3D structure

PDB id

6ORD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGAG*CGCCGGUGAAAUAC

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ORD_145 not in the Motif Atlas

Homologous match to IL_7RQB_086

Geometric discrepancy: 0.1832

The information below is about IL_7RQB_086

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ORD|1|RA|G|2124
6ORD|1|RA|G|2125
6ORD|1|RA|A|2126
6ORD|1|RA|G|2127
*
6ORD|1|RA|C|2161
6ORD|1|RA|G|2162
6ORD|1|RA|C|2163
6ORD|1|RA|C|2164
6ORD|1|RA|G|2165
6ORD|1|RA|G|2166
6ORD|1|RA|U|2167
6ORD|1|RA|G|2168
6ORD|1|RA|A|2169
6ORD|1|RA|A|2170
6ORD|1|RA|A|2171
6ORD|1|RA|U|2172
6ORD|1|RA|A|2173
6ORD|1|RA|C|2174

Current chains

Chain RA

23S rRNA

Nearby chains