IL_6ORD_193

3D structure

PDB id

6ORD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GAAACC*GACUGAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ORD_193 not in the Motif Atlas

Geometric match to IL_4LFB_019

Geometric discrepancy: 0.0842

The information below is about IL_4LFB_019

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_31561.1

Basepair signature

cWW-L-R-tWH-tWH-L-R-L-cWW

Number of instances in this motif group

1

Unit IDs

6ORD|1|XA|G|450
6ORD|1|XA|A|451
6ORD|1|XA|A|452
6ORD|1|XA|A|453
6ORD|1|XA|C|454
6ORD|1|XA|C|455
*
6ORD|1|XA|G|476
6ORD|1|XA|A|477
6ORD|1|XA|C|479
6ORD|1|XA|U|480
6ORD|1|XA|G|481
6ORD|1|XA|A|482
6ORD|1|XA|C|483

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XP

30S ribosomal protein S16