IL_6ORD_293

3D structure

PDB id

6ORD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UG*CAACAAG

Length

9 nucleotides

Bulged bases

6ORD|1|YA|C|1509|||A

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ORD_293 not in the Motif Atlas

Homologous match to IL_7RQB_061

Geometric discrepancy: 0.2638

The information below is about IL_7RQB_061

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_52493.1

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

2

Unit IDs

6ORD|1|YA|U|1481
6ORD|1|YA|G|1482
*
6ORD|1|YA|C|1506
6ORD|1|YA|A|1507
6ORD|1|YA|A|1508
6ORD|1|YA|C|1509|||A
6ORD|1|YA|A|1509|||B
6ORD|1|YA|A|1509|||C
6ORD|1|YA|G|1510

Current chains

Chain YA

23S rRNA

Nearby chains