IL_6ORD_348

3D structure

PDB id

6ORD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GUC*GAUAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ORD_348 not in the Motif Atlas

Homologous match to IL_6CZR_361

Geometric discrepancy: 0.1519

The information below is about IL_6CZR_361

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_56539.1

Basepair signature

cWW-cWW-cSH-cWW-L

Number of instances in this motif group

4

Unit IDs

6ORD|1|QA|G|597
6ORD|1|QA|U|598
6ORD|1|QA|C|599
*
6ORD|1|QA|G|639
6ORD|1|QA|A|640
6ORD|1|QA|U|641
6ORD|1|QA|A|642
6ORD|1|QA|C|643

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QH

30S ribosomal protein S8

Chain QQ

30S ribosomal protein S17