IL_6ORE_182

3D structure

PDB id

6ORE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Release complex 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ORE_182 not in the Motif Atlas

Homologous match to IL_5J7L_387

Geometric discrepancy: 0.0556

The information below is about IL_5J7L_387

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61249.1

Basepair signature

cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

6ORE|1|1|U|1851
6ORE|1|1|U|1852
6ORE|1|1|A|1853
6ORE|1|1|A|1854
6ORE|1|1|U|1855
6ORE|1|1|U|1856
6ORE|1|1|G|1857
6ORE|1|1|A|1858
6ORE|1|1|U|1859
6ORE|1|1|G|1860
*
6ORE|1|1|U|1882
6ORE|1|1|U|1883
6ORE|1|1|G|1884
6ORE|1|1|A|1885
6ORE|1|1|U|1886
6ORE|1|1|C|1887
6ORE|1|1|G|1888
6ORE|1|1|A|1889
6ORE|1|1|A|1890
6ORE|1|1|G|1891

Current chains

Chain 1

23S ribosomal RNA

Nearby chains