IL_6ORE_194

3D structure

PDB id

6ORE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Release complex 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

(5MC)AC*GAAG

Length

7 nucleotides

Bulged bases

6ORE|1|2|A|1493

QA status

Modified nucleotides: 5MC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ORE_194 not in the Motif Atlas

Geometric match to IL_3C3Z_002

Geometric discrepancy: 0.2714

The information below is about IL_3C3Z_002

Detailed Annotation

Decoding loop related

Broad Annotation

Decoding loop related

Motif group

IL_29925.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

10

Unit IDs

6ORE|1|2|5MC|1407
6ORE|1|2|A|1408
6ORE|1|2|C|1409
*
6ORE|1|2|G|1491
6ORE|1|2|A|1492
6ORE|1|2|A|1493
6ORE|1|2|G|1494

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA

Chain 4

RNA (5'-R(P*UP*UP*CP*UP*UP*CP*UP*AP*A)-3')

Chain q

30S ribosomal protein S12