IL_6ORL_040
3D structure
- PDB id
- 6ORL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RF1 pre-accommodated 70S complex at 24 ms
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CGUU*AAGUG
- Length
- 9 nucleotides
- Bulged bases
- 6ORL|1|1|G|1248
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ORL_040 not in the Motif Atlas
- Geometric match to IL_3WBM_002
- Geometric discrepancy: 0.2797
- The information below is about IL_3WBM_002
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
6ORL|1|1|C|1196
6ORL|1|1|G|1197
6ORL|1|1|U|1198
6ORL|1|1|U|1199
*
6ORL|1|1|A|1246
6ORL|1|1|A|1247
6ORL|1|1|G|1248
6ORL|1|1|U|1249
6ORL|1|1|G|1250
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain D
- 50S ribosomal protein L4
- Chain L
- 50S ribosomal protein L15
- Chain Q
- 50S ribosomal protein L20
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