IL_6ORL_153
3D structure
- PDB id
- 6ORL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RF1 pre-accommodated 70S complex at 24 ms
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UG*CAA
- Length
- 5 nucleotides
- Bulged bases
- 6ORL|1|2|A|1196
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ORL_153 not in the Motif Atlas
- Homologous match to IL_6CZR_156
- Geometric discrepancy: 0.1704
- The information below is about IL_6CZR_156
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_89505.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 123
Unit IDs
6ORL|1|2|U|1060
6ORL|1|2|G|1061
*
6ORL|1|2|C|1195
6ORL|1|2|A|1196
6ORL|1|2|A|1197
Current chains
- Chain 2
- 16S ribosomal RNA
Nearby chains
- Chain 4
- mRNA
- Chain A
- Peptide chain release factor 1
- Chain h
- 30S ribosomal protein S3
- Chain j
- 30S ribosomal protein S5
- Chain o
- 30S ribosomal protein S10
- Chain s
- 30S ribosomal protein S14
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