IL_6OSI_030

3D structure

PDB id

6OSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

4.14 Å

Loop

Sequence

GAGAG*UGGU

Length

9 nucleotides

Bulged bases

6OSI|1|QA|A|665

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OSI_030 not in the Motif Atlas

Homologous match to IL_5J7L_033

Geometric discrepancy: 0.1943

The information below is about IL_5J7L_033

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_85033.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

6OSI|1|QA|G|662
6OSI|1|QA|A|663
6OSI|1|QA|G|664
6OSI|1|QA|A|665
6OSI|1|QA|G|666
*
6OSI|1|QA|U|740
6OSI|1|QA|G|741
6OSI|1|QA|G|742
6OSI|1|QA|U|743

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QF

30S ribosomal protein S6

Chain QO

30S ribosomal protein S15

Chain QR

30S ribosomal protein S18