IL_6OSI_050

3D structure

PDB id

6OSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

4.14 Å

Loop

Sequence

UUGGG*CCCA

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OSI_050 not in the Motif Atlas

Geometric match to IL_1HYS_004

Geometric discrepancy: 0.3417

The information below is about IL_1HYS_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_64231.5

Basepair signature

cWW-cWW-L-R-L-cWW

Number of instances in this motif group

11

Unit IDs

6OSI|1|QA|U|1307
6OSI|1|QA|U|1308
6OSI|1|QA|G|1309
6OSI|1|QA|G|1310
6OSI|1|QA|G|1311
*
6OSI|1|QA|C|1326
6OSI|1|QA|C|1327
6OSI|1|QA|C|1328
6OSI|1|QA|A|1329

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QM

30S ribosomal protein S13

Chain QS

30S ribosomal protein S19

Chain QU

30S ribosomal protein Thx