IL_6OSI_091

3D structure

PDB id

6OSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

4.14 Å

Loop

Sequence

GGG*CUAC

Length

7 nucleotides

Bulged bases

6OSI|1|RA|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OSI_091 not in the Motif Atlas

Geometric match to IL_4WF9_018

Geometric discrepancy: 0.2253

The information below is about IL_4WF9_018

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_07785.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

33

Unit IDs

6OSI|1|RA|G|880
6OSI|1|RA|G|881
6OSI|1|RA|G|882
*
6OSI|1|RA|C|894
6OSI|1|RA|U|895
6OSI|1|RA|A|896
6OSI|1|RA|C|897

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RZ

50S ribosomal protein L25