IL_6OSI_191

3D structure

PDB id

6OSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

4.14 Å

Loop

Sequence

GAAACC*GACUGAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OSI_191 not in the Motif Atlas

Geometric match to IL_4LFB_019

Geometric discrepancy: 0.1419

The information below is about IL_4LFB_019

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_31561.1

Basepair signature

cWW-L-R-tWH-tWH-L-R-L-cWW

Number of instances in this motif group

1

Unit IDs

6OSI|1|XA|G|450
6OSI|1|XA|A|451
6OSI|1|XA|A|452
6OSI|1|XA|A|453
6OSI|1|XA|C|454
6OSI|1|XA|C|455
*
6OSI|1|XA|G|477
6OSI|1|XA|A|478
6OSI|1|XA|C|479
6OSI|1|XA|U|480
6OSI|1|XA|G|481
6OSI|1|XA|A|482
6OSI|1|XA|C|483

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XP

30S ribosomal protein S16