IL_6OSI_287

3D structure

PDB id

6OSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

4.14 Å

Loop

Sequence

UG*CAACAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OSI_287 not in the Motif Atlas

Homologous match to IL_7RQB_061

Geometric discrepancy: 0.5742

The information below is about IL_7RQB_061

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_52493.1

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

2

Unit IDs

6OSI|1|YA|U|1482
6OSI|1|YA|G|1483
*
6OSI|1|YA|C|1506
6OSI|1|YA|A|1507
6OSI|1|YA|A|1508
6OSI|1|YA|C|1509
6OSI|1|YA|A|1510
6OSI|1|YA|A|1511
6OSI|1|YA|G|1512

Current chains

Chain YA

23S rRNA

Nearby chains