IL_6OSI_307
3D structure
- PDB id
- 6OSI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4.14 Å
Loop
- Sequence
- CUGGU*GCUUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OSI_307 not in the Motif Atlas
- Geometric match to IL_4V88_422
- Geometric discrepancy: 0.2286
- The information below is about IL_4V88_422
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05145.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 13
Unit IDs
6OSI|1|YA|C|2085
6OSI|1|YA|U|2086
6OSI|1|YA|G|2087
6OSI|1|YA|G|2088
6OSI|1|YA|U|2089
*
6OSI|1|YA|G|2230
6OSI|1|YA|C|2231
6OSI|1|YA|U|2232
6OSI|1|YA|U|2233
6OSI|1|YA|G|2234
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain XV
- Transfer RNA; tRNA
- Chain Y1
- 50S ribosomal protein L28
- Chain YD
- 50S ribosomal protein L2
Coloring options: