IL_6OSI_383

3D structure

PDB id

6OSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

4.14 Å

Loop

Sequence

CC*GAG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OSI_383 not in the Motif Atlas

Homologous match to IL_4WF9_028

Geometric discrepancy: 0.1424

The information below is about IL_4WF9_028

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_90729.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

30

Unit IDs

6OSI|1|RA|C|837
6OSI|1|RA|C|838
*
6OSI|1|RA|G|940
6OSI|1|RA|A|941
6OSI|1|RA|G|942

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R3

50S ribosomal protein L30

Chain R8

50S ribosomal protein L35

Chain RP

50S ribosomal protein L15