IL_6OSK_052

3D structure

PDB id

6OSK (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF1 accommodated 70S complex at 60 ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUAU*AAAUG

Length

9 nucleotides

Bulged bases

6OSK|1|1|U|1554

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OSK_052 not in the Motif Atlas

Homologous match to IL_5J7L_297

Geometric discrepancy: 0.083

The information below is about IL_5J7L_297

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_99646.2

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

6OSK|1|1|C|1437
6OSK|1|1|U|1438
6OSK|1|1|A|1439
6OSK|1|1|U|1440
*
6OSK|1|1|A|1551
6OSK|1|1|A|1552
6OSK|1|1|A|1553
6OSK|1|1|U|1554
6OSK|1|1|G|1555

Current chains

Chain 1

23S ribosomal RNA

Nearby chains