IL_6OSK_076
3D structure
- PDB id
- 6OSK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RF1 accommodated 70S complex at 60 ms
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CCCG*CG(2MG)G
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OSK_076 not in the Motif Atlas
- Geometric match to IL_1D4R_001
- Geometric discrepancy: 0.2036
- The information below is about IL_1D4R_001
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
6OSK|1|1|C|2064
6OSK|1|1|C|2065
6OSK|1|1|C|2066
6OSK|1|1|G|2067
*
6OSK|1|1|C|2443
6OSK|1|1|G|2444
6OSK|1|1|2MG|2445
6OSK|1|1|G|2446
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain 5
- Transfer RNA; tRNA
- Chain 6
- FME-PHE-PHE
- Chain D
- 50S ribosomal protein L4
- Chain L
- 50S ribosomal protein L15
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