IL_6OSQ_143

3D structure

PDB id

6OSQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF1 accommodated state bound Release complex 70S at long incubation time point

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CGGG*UUG

Length

7 nucleotides

Bulged bases

6OSQ|1|2|G|926

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OSQ_143 not in the Motif Atlas

Geometric match to IL_4WF9_018

Geometric discrepancy: 0.2668

The information below is about IL_4WF9_018

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_71625.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

78

Unit IDs

6OSQ|1|2|C|924
6OSQ|1|2|G|925
6OSQ|1|2|G|926
6OSQ|1|2|G|927
*
6OSQ|1|2|U|1390
6OSQ|1|2|U|1391
6OSQ|1|2|G|1392

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain 4

mRNA

Chain j

30S ribosomal protein S5