IL_6OSQ_154

3D structure

PDB id

6OSQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF1 accommodated state bound Release complex 70S at long incubation time point

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUUGC*GAACUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OSQ_154 not in the Motif Atlas

Homologous match to IL_5J7L_051

Geometric discrepancy: 0.1308

The information below is about IL_5J7L_051

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_06691.1

Basepair signature

cWW-cWS-L-R-L-R-cWW-L

Number of instances in this motif group

2

Unit IDs

6OSQ|1|2|G|1124
6OSQ|1|2|U|1125
6OSQ|1|2|U|1126
6OSQ|1|2|G|1127
6OSQ|1|2|C|1128
*
6OSQ|1|2|G|1144
6OSQ|1|2|A|1145
6OSQ|1|2|A|1146
6OSQ|1|2|C|1147
6OSQ|1|2|U|1148
6OSQ|1|2|C|1149

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain n

30S ribosomal protein S9

Chain o

30S ribosomal protein S10