IL_6OSQ_181

3D structure

PDB id

6OSQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF1 accommodated state bound Release complex 70S at long incubation time point

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OSQ_181 not in the Motif Atlas

Homologous match to IL_5J7L_387

Geometric discrepancy: 0.1021

The information below is about IL_5J7L_387

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61249.1

Basepair signature

cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

6OSQ|1|1|U|1851
6OSQ|1|1|U|1852
6OSQ|1|1|A|1853
6OSQ|1|1|A|1854
6OSQ|1|1|U|1855
6OSQ|1|1|U|1856
6OSQ|1|1|G|1857
6OSQ|1|1|A|1858
6OSQ|1|1|U|1859
6OSQ|1|1|G|1860
*
6OSQ|1|1|U|1882
6OSQ|1|1|U|1883
6OSQ|1|1|G|1884
6OSQ|1|1|A|1885
6OSQ|1|1|U|1886
6OSQ|1|1|C|1887
6OSQ|1|1|G|1888
6OSQ|1|1|A|1889
6OSQ|1|1|A|1890
6OSQ|1|1|G|1891

Current chains

Chain 1

23S ribosomal RNA

Nearby chains