IL_6OST_009

3D structure

PDB id

6OST (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF2 pre-accommodated state bound Release complex 70S at 24ms

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OST_009 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.4509

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

6OST|1|1|C|274
6OST|1|1|C|275
6OST|1|1|U|276
6OST|1|1|G|277
6OST|1|1|A|278
6OST|1|1|A|279
6OST|1|1|U|280
6OST|1|1|C|281
*
6OST|1|1|G|359
6OST|1|1|U|360
6OST|1|1|G|361
6OST|1|1|A|362
6OST|1|1|G|363

Current chains

Chain 1

23S Ribosomal RNA

Nearby chains