IL_6OST_022

3D structure

PDB id

6OST (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF2 pre-accommodated state bound Release complex 70S at 24ms

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

CC*GAG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OST_022 not in the Motif Atlas

Homologous match to IL_4WF9_028

Geometric discrepancy: 0.1204

The information below is about IL_4WF9_028

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_15011.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

54

Unit IDs

6OST|1|1|C|837
6OST|1|1|C|838
*
6OST|1|1|G|940
6OST|1|1|A|941
6OST|1|1|G|942

Current chains

Chain 1

23S Ribosomal RNA

Nearby chains

Chain L

50S ribosomal protein L15

Chain e

50S ribosomal protein L35