IL_6OST_185

3D structure

PDB id

6OST (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF2 pre-accommodated state bound Release complex 70S at 24ms

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

UUGAUGUGUAGGAUAGGUGGGAGGC*GCCGACCUUGAAAUACCACCCUUUAA

Length

51 nucleotides

Bulged bases

6OST|1|1|U|2111, 6OST|1|1|G|2116, 6OST|1|1|U|2118, 6OST|1|1|C|2164, 6OST|1|1|U|2172

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OST|1|1|U|2105
6OST|1|1|U|2106
6OST|1|1|G|2107
6OST|1|1|A|2108
6OST|1|1|U|2109
6OST|1|1|G|2110
6OST|1|1|U|2111
6OST|1|1|G|2112
6OST|1|1|U|2113
6OST|1|1|A|2114
6OST|1|1|G|2115
6OST|1|1|G|2116
6OST|1|1|A|2117
6OST|1|1|U|2118
6OST|1|1|A|2119
6OST|1|1|G|2120
6OST|1|1|G|2121
6OST|1|1|U|2122
6OST|1|1|G|2123
6OST|1|1|G|2124
6OST|1|1|G|2125
6OST|1|1|A|2126
6OST|1|1|G|2127
6OST|1|1|G|2128
6OST|1|1|C|2129
*
6OST|1|1|G|2159
6OST|1|1|C|2160
6OST|1|1|C|2161
6OST|1|1|G|2162
6OST|1|1|A|2163
6OST|1|1|C|2164
6OST|1|1|C|2165
6OST|1|1|U|2166
6OST|1|1|U|2167
6OST|1|1|G|2168
6OST|1|1|A|2169
6OST|1|1|A|2170
6OST|1|1|A|2171
6OST|1|1|U|2172
6OST|1|1|A|2173
6OST|1|1|C|2174
6OST|1|1|C|2175
6OST|1|1|A|2176
6OST|1|1|C|2177
6OST|1|1|C|2178
6OST|1|1|C|2179
6OST|1|1|U|2180
6OST|1|1|U|2181
6OST|1|1|U|2182
6OST|1|1|A|2183
6OST|1|1|A|2184

Current chains

Chain 1

23S Ribosomal RNA

Nearby chains