3D structure

PDB id
6OT3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF2 accommodated state bound Release complex 70S at 24 ms
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
AUC*GAAU
Length
7 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6OT3_024 not in the Motif Atlas
Geometric match to IL_4P3T_002
Geometric discrepancy: 0.2325
The information below is about IL_4P3T_002
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_01472.1
Basepair signature
cWW-L-R-L-cWW
Number of instances in this motif group
5

Unit IDs

6OT3|1|1|A|849
6OT3|1|1|U|850
6OT3|1|1|C|851
*
6OT3|1|1|G|926
6OT3|1|1|A|927
6OT3|1|1|A|928
6OT3|1|1|U|929

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain Z
50S ribosomal protein L30

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.1631 s