3D structure

PDB id
6OT3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF2 accommodated state bound Release complex 70S at 24 ms
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
CUGC*GAGGAAG
Length
11 nucleotides
Bulged bases
6OT3|1|2|U|1159
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6OT3_155 not in the Motif Atlas
Homologous match to IL_4LFB_050
Geometric discrepancy: 0.222
The information below is about IL_4LFB_050
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_42032.1
Basepair signature
cWW-cSH-cWW-tWH-L-cWW-L-L
Number of instances in this motif group
2

Unit IDs

6OT3|1|2|C|1158
6OT3|1|2|U|1159
6OT3|1|2|G|1160
6OT3|1|2|C|1161
*
6OT3|1|2|G|1175
6OT3|1|2|A|1176
6OT3|1|2|G|1177
6OT3|1|2|G|1178
6OT3|1|2|A|1179
6OT3|1|2|A|1180
6OT3|1|2|G|1181

Current chains

Chain 2
16S ribosomal RNA

Nearby chains

Chain g
30S ribosomal protein S2
Chain n
30S ribosomal protein S9

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.3961 s