IL_6OT3_174

3D structure

PDB id

6OT3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF2 accommodated state bound Release complex 70S at 24 ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GACG*CGUU

Length

8 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OT3_174 not in the Motif Atlas

Geometric match to IL_8CRE_433

Geometric discrepancy: 0.3341

The information below is about IL_8CRE_433

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_85033.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

6OT3|1|1|G|1168
6OT3|1|1|A|1169
6OT3|1|1|C|1170
6OT3|1|1|G|1171
*
6OT3|1|1|C|1178
6OT3|1|1|G|1179
6OT3|1|1|U|1180
6OT3|1|1|U|1181

Current chains

Chain 1

23S ribosomal RNA

Nearby chains