IL_6OT3_175

3D structure

PDB id

6OT3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF2 accommodated state bound Release complex 70S at 24 ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GCA*UGC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OT3_175 not in the Motif Atlas

Geometric match to IL_5Z1I_001

Geometric discrepancy: 0.1959

The information below is about IL_5Z1I_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_10289.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

237

Unit IDs

6OT3|1|1|G|1530
6OT3|1|1|C|1531
6OT3|1|1|A|1532
*
6OT3|1|1|U|1539
6OT3|1|1|G|1540
6OT3|1|1|C|1541

Current chains

Chain 1

23S ribosomal RNA

Nearby chains